Basic Statistics
Measure | Value |
---|---|
Filename | SRR1926801_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 945087 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCCTACAGTGGACATTTCTAAATT | 2452 | 0.2594470138727969 | No Hit |
CTGTAGGACGTGGAATATGGCAAGA | 2358 | 0.2495008396052427 | No Hit |
GTCCTAAAGTGTGTATTTCTCATTT | 1752 | 0.1853797586888826 | No Hit |
GTATCAACGCAGAGTACTTTTTTTT | 1731 | 0.18315774103336518 | No Hit |
CTTTAGGACGTGAAATATGGCGAGG | 1711 | 0.1810415337423962 | No Hit |
GTCCTACAGTGTGCATTTCTCATTT | 1619 | 0.1713069802039389 | No Hit |
CTGTAGGACCTGGAATATGGCGAGA | 1282 | 0.1356488873511116 | No Hit |
GTACATGGGAAGCAGTGGTATCAAC | 1018 | 0.10771495111032106 | No Hit |
GGTATCAACGCAGAGTACTTTTTTT | 982 | 0.1039057779865769 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TAGGACC | 590 | 0.0 | 14.5238 | 4 |
CCAACGA | 100 | 6.693881E-10 | 14.233373 | 19 |
AGGACCT | 900 | 0.0 | 13.012248 | 5 |
GGCGAGG | 475 | 0.0 | 12.585299 | 19 |
TCCAACG | 145 | 7.2759576E-12 | 12.43375 | 18 |
CTGTAGG | 1300 | 0.0 | 12.390003 | 1 |
TGTAGGA | 1335 | 0.0 | 12.350738 | 2 |
GGACCTG | 880 | 0.0 | 12.334227 | 6 |
GTCGAGG | 55 | 0.0030938487 | 12.076801 | 19 |
GTCTTAG | 130 | 2.4792826E-9 | 11.730181 | 1 |
AGGACGT | 1050 | 0.0 | 11.697423 | 5 |
GTAGGAC | 1345 | 0.0 | 11.682091 | 3 |
ACTGTTC | 325 | 0.0 | 11.678046 | 8 |
GACCTGG | 910 | 0.0 | 11.470118 | 7 |
GGACGTG | 1030 | 0.0 | 11.462363 | 6 |
GTCCTAC | 1255 | 0.0 | 11.315418 | 1 |
TAGGACG | 1115 | 0.0 | 11.271684 | 4 |
ATAATAC | 110 | 4.809117E-7 | 11.25407 | 3 |
TGGCGAG | 1295 | 0.0 | 11.1375675 | 18 |
AGTATAC | 60 | 0.0057694516 | 11.109787 | 3 |