SRR1926797_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926797_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	303984
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAAC	739	0.2431049002579083	No Hit
CCCATGTACTCTGCGTTGATACCAC	711	0.23389388915206066	No Hit
GTATCAACGCAGAGTACTTTTTTTT	597	0.19639191536396655	No Hit
GTCCTACAGTGGACATTTCTAAATT	445	0.14638928364650772	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	417	0.13717827254066003	No Hit
CTGTAGGACGTGGAATATGGCAAGA	391	0.12862519079951576	No Hit
GGTATCAACGCAGAGTACTTTTTTT	384	0.12632243802305385	No Hit
TATCAACGCAGAGTACTTTTTTTTT	354	0.11645349755250275	No Hit
CTTTAGGACGTGAAATATGGCGAGG	322	0.10592662771724828	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGAGTG	30	7.6230423E-4	19.029549	5
GTCCTAG	35	0.002102561	16.356941	1
GTCCTAT	45	6.520657E-4	14.84241	1
GCTTCCT	45	6.694615E-4	14.790993	8
GTTCTAG	40	0.00511579	14.312324	1
GTATAAT	40	0.00511579	14.312324	1
CTTGCTC	40	0.005160933	14.293395	3
ATATACT	40	0.005177948	14.28631	4
TATACTG	40	0.0052121193	14.272161	5
GTCCTAA	145	0.0	13.160758	1
TAGGACC	80	1.928378E-6	13.095784	4
TGTAGGA	255	0.0	13.078924	2
AGACCAG	60	4.0220757E-4	12.686366	5
CTGTGTA	60	4.124073E-4	12.648783	9
TAAAGTG	155	1.8189894E-12	12.277127	5
AAGGTGT	70	1.069689E-4	12.233281	6
GTACTGA	55	0.0029602489	12.143791	1
TAGACCA	55	0.00300089	12.121717	4
TATTGTG	55	0.0030232586	12.109713	5
ACCATCC	65	7.93108E-4	11.702764	8