SRR1926796_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926796_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	769855
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1537	0.1996479856596372	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1526	0.19821914516369965	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1362	0.17691643231517623	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1020	0.1324924823505725	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1019	0.13236258776003273	No Hit
GGTATCAACGCAGAGTACTTTTTTT	970	0.12599775282358366	No Hit
CTTTAGGACGTGAAATATGGCGAGG	948	0.12314007183170857	No Hit
TATCAACGCAGAGTACTTTTTTTTT	863	0.11209903163582752	No Hit
CTGTAGGACCTGGAATATGGCGAGA	820	0.10651356424261711	No Hit
CACACACACACACACACACACACAC	786	0.10209714816426471	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAACGA	35	1.00274956E-4	18.97616	19
CGTGCGC	35	0.0021880758	16.264223	10
GTGCGCC	45	6.8248285E-4	14.758276	11
CGTTTCC	45	6.8315543E-4	14.756359	14
GTCTTAG	80	1.2297278E-7	14.301799	1
GGTTATA	80	1.2297278E-7	14.301799	1
GACCTAT	40	0.005150379	14.301799	1
GTTGGAC	40	0.005188428	14.285945	3
TAGACAG	100	6.330083E-10	14.285014	5
CTAAACT	60	2.5062423E-5	14.285013	4
TCCAACG	80	1.3053977E-7	14.2321205	18
GCGTGCG	40	0.005322319	14.231195	9
GGCGAGG	230	0.0	13.613333	19
TAGGACC	275	0.0	13.505831	4
TGTAGGA	815	0.0	13.101814	2
GTAGGAC	765	0.0	12.698617	3
CTACTAA	55	0.0029838015	12.134859	1
CACTAGG	55	0.0029838015	12.134859	1
TGGCGAG	650	0.0	12.115548	18
CCGTTTC	55	0.0030995111	12.073385	13