SRR1926787_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926787_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	624463
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1878	0.30073839442849293	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1573	0.2518964294121509	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1454	0.23284005617626663	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1290	0.20657749138059422	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1235	0.1977699239186309	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1172	0.18768125573492744	No Hit
GTACATGGGAAGCAGTGGTATCAAC	935	0.14972864685337642	No Hit
CCCATGTACTCTGCGTTGATACCAC	864	0.13835887794793286	No Hit
CTGTAGGACCTGGAATATGGCGAGA	793	0.1269891090424893	No Hit
CTGAAGGACCTGGAATATGGCGAGA	745	0.1193025047120486	No Hit
GGTATCAACGCAGAGTACTTTTTTT	667	0.10681177267508243	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGTTTC	50	0.0015206882	13.273252	13
TAGGACC	345	0.0	12.419112	4
ATAGGAC	70	1.04882376E-4	12.263401	3
ACTGTTC	210	0.0	12.226941	8
TAGTACC	55	0.0030138574	12.118043	4
CCAGTAC	65	7.7462546E-4	11.739325	3
CAGGACT	140	6.511982E-10	11.561602	4
TAGAAAT	250	0.0	11.425583	4
GTACCAT	85	5.212146E-5	11.197048	6
CTATAAC	60	0.005668889	11.13508	1
CTTATAC	60	0.005696183	11.127901	3
GCAGGAC	70	0.0014401783	10.900802	3
CAGTACC	70	0.0014616302	10.881508	4
AAAGGCG	70	0.0014665443	10.877132	5
AGTACCA	70	0.0014665443	10.877132	5
ATTTAGA	230	0.0	10.78927	1
AGAAATG	300	0.0	10.7864895	5
TGTAGGA	940	0.0	10.657809	2
TAGGACA	225	0.0	10.579244	4
CAGTGCA	90	9.6575284E-5	10.5377035	9