SRR1926787_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926787_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	624463
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	2013	0.3223569691078575	No Hit
GTCCTACAGTGGACATTTCTAAATT	1805	0.2890483503426144	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1754	0.2808813332415211	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1595	0.25541945639693625	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1559	0.2496545031491057	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1251	0.20033212536211112	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1227	0.1964888231968908	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1095	0.1753506612881788	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1038	0.16622281864578045	No Hit
CCCATGTACTCTGCGTTGATACCAC	996	0.15949703985664482	No Hit
CTGTAGGACCTGGAATATGGCGAGA	946	0.1514901603457691	No Hit
CTGAAGGACCTGGAATATGGCGAGA	858	0.13739805240662778	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	673	0.10777259821638753	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGTCGA	35	0.0021880649	16.263542	17
TGTCGAG	35	0.0021880649	16.263542	18
TAAGAGT	85	2.6124872E-7	13.444108	4
GTATAGT	75	1.4143297E-5	12.718684	1
GCCGGTT	75	1.4972706E-5	12.648409	11
CCGGTTT	75	1.498504E-5	12.647396	12
GTCCTAT	85	3.756426E-6	12.344605	1
TCTAGGG	55	0.0029740233	12.139585	2
CCAGTAC	55	0.0030064706	12.122016	3
CTAATAC	55	0.0030064706	12.122016	3
TATGACC	55	0.0030100946	12.120067	4
CCAACGT	55	0.003096342	12.074448	19
CTGTACT	105	2.626184E-7	11.79027	4
TAAGGAG	65	7.851292E-4	11.720504	5
GTCCTAA	540	0.0	11.658793	1
CTATACT	115	6.810842E-8	11.593108	4
GGCGAGG	395	0.0	11.528586	19
TGTCCAC	240	0.0	11.462621	10
CTAGGAC	85	5.1735355E-5	11.205225	3
CGGTTTC	85	5.3938078E-5	11.159468	13