SRR1926784_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926784_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	648421
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1269	0.1957061847164111	No Hit
GTCCTACAGTGGACATTTCTAAATT	1092	0.16840910457866107	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1000	0.15422079173870062	No Hit
GTCCTACAGTGTGCATTTCTCATTT	842	0.12985390664398594	No Hit
CACACACACACACACACACACACAC	828	0.12769481555964413	No Hit
GGTATCAACGCAGAGTACTTTTTTT	755	0.11643669776271898	No Hit
CTTTAGGACGTGAAATATGGCGAGG	697	0.10749189184187434	No Hit
TATCAACGCAGAGTACTTTTTTTTT	696	0.10733767105013563	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	692	0.10672078788318082	No Hit
CTGTAGGACCTGGAATATGGCGAGA	683	0.10533280075753253	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGAAC	30	7.774056E-4	18.978867	18
GCCTCGA	40	2.7815142E-4	16.60651	16
GGCCTCG	40	2.7815142E-4	16.60651	15
TCGAACT	35	0.0021845424	16.267601	19
TAGGACC	245	0.0	15.928186	4
TCCTATA	105	5.456968E-12	15.432881	2
CCTCGAA	45	6.8120385E-4	14.761343	17
ACCGTGC	45	6.8160234E-4	14.760203	8
AACTGCC	65	3.4011573E-6	14.600255	7
CCCTAGC	55	1.8996882E-4	13.8669815	1
GGACACC	55	1.9260793E-4	13.844455	6
TCCAACG	70	7.330711E-6	13.5563345	18
GCCTAGG	50	0.0014586193	13.346971	1
GCCGGTT	50	0.001510517	13.285207	11
TGCGCCA	50	0.0015113952	13.2841835	12
TCAGGAC	125	9.822543E-11	12.94757	3
GGACTGT	105	1.933222E-8	12.690751	6
GGACCTT	60	4.021323E-4	12.690751	6
CTAGGAC	130	1.891749E-10	12.449587	3
ATAGGAC	85	3.840625E-6	12.320353	3