SRR1926776_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926776_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	613808
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1270	0.2069050908427391	No Hit
GTCCTACAGTGGACATTTCTAAATT	1262	0.20560175168782419	No Hit
GTACATGGGAAGCAGTGGTATCAAC	997	0.1624286421812684	No Hit
GTCCTACAGTGTGCATTTCTCATTT	991	0.16145113781508225	No Hit
CTGTAGGACGTGGAATATGGCAAGA	957	0.15591194640669395	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	910	0.14825482887156896	No Hit
CCCATGTACTCTGCGTTGATACCAC	767	0.12495764147746527	No Hit
TATCAACGCAGAGTACTTTTTTTTT	694	0.11306467168886687	No Hit
GGTATCAACGCAGAGTACTTTTTTT	680	0.1107838281677658	No Hit
CTTTAGGACGTGAAATATGGCGAGG	664	0.10817714985793603	No Hit
CTGTAGGACCTGGAATATGGCGAGA	629	0.10247504105518339	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAACGA	45	3.5714278E-5	16.86774	19
GGACGAG	35	0.00215095	16.305178	6
TCCAACG	60	1.48252E-6	15.813506	18
TCGCCTT	40	0.005164943	14.295053	1
GTCTAGG	100	9.591531E-9	13.34205	1
TAGGACC	265	0.0	13.2876005	4
GTATAAG	65	5.283116E-5	13.195433	1
GGCGAGG	165	0.0	12.650806	19
AGGACCT	360	0.0	12.153397	5
ATAATAC	80	2.7874043E-5	11.90475	3
CCTGCAC	120	9.598807E-9	11.90475	3
AGACAGT	80	2.8249755E-5	11.889193	6
GTCCTAA	245	0.0	11.669432	1
GTCCTAC	645	0.0	11.5246935	1
CTGTAGG	680	0.0	11.492101	1
GGACCTG	345	0.0	11.303348	6
TGGCGAG	455	0.0	11.260607	18
GTCCTGC	85	5.1423376E-5	11.211805	1
TGTAGGA	740	0.0	11.196899	2
GTAGGAC	700	0.0	11.020397	3