SRR1926766_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926766_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	769041
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1797	0.23366764580822091	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1767	0.22976668344080486	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1669	0.21702353970724578	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1379	0.17931423682222405	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1314	0.17086215169282262	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1306	0.16982189506151169	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1114	0.144855735910049	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1057	0.13744390741195853	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1014	0.1318525280186622	No Hit
GTACATGGGAAGCAGTGGTATCAAC	881	0.11455826152311774	No Hit
CCCATGTACTCTGCGTTGATACCAC	820	0.1066263047093718	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTATA	40	2.6821555E-4	16.686531	1
TAGGACC	440	0.0	14.071318	4
CCTATAC	50	0.0014679972	13.336152	3
TCTATAC	95	7.1106115E-8	13.035337	3
GTCCTAT	75	1.4212374E-5	12.713548	1
ATAGGAC	120	7.057679E-10	12.701097	3
ATTGGAC	60	3.9952714E-4	12.701097	3
ACGAAAT	55	0.0030981153	12.074109	12
AGGACCT	735	0.0	11.9227	5
GTTCTAG	105	2.5857298E-7	11.805438	1
CTGTAGG	1090	0.0	11.722124	1
GGCGAGG	335	0.0	11.61071	19
CTATAGT	115	6.7971996E-8	11.595896	4
GGACCTG	780	0.0	11.35697	6
TGTAGGA	1080	0.0	11.299454	2
CTATACA	135	4.5165507E-9	11.289127	4
TCTTAGG	60	0.0057173446	11.122901	2
TAAGGGT	60	0.0057564075	11.112734	4
TGCACCG	60	0.0057564075	11.112734	5
GTCCTAC	860	0.0	11.087397	1