SRR1926747_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926747_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	613557
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1871	0.30494314301686726	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1737	0.2831032813577223	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1402	0.22850362720985987	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1257	0.20487094108615828	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1176	0.19166923366533184	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1100	0.17928244645566752	No Hit
GTATCAACGCAGAGTACTTTTTTTT	973	0.15858347309214957	No Hit
CTGAAGGACCTGGAATATGGCGAGA	694	0.11311092530930297	No Hit
GGTATCAACGCAGAGTACTTTTTTT	688	0.1121330210559084	No Hit
CACACACACACACACACACACACAC	622	0.10137607426856836	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACGGC	30	7.7708723E-4	18.97979	15
GAATACG	40	0.0053116567	14.234841	13
AATACGG	40	0.0053116567	14.234841	14
GTCCTAC	900	0.0	13.973174	1
CTTGGGC	55	1.923561E-4	13.846365	3
GTCCTAT	90	3.4911864E-8	13.76146	1
CTAGACT	70	7.100447E-6	13.597997	4
TAGGACC	345	0.0	13.519167	4
AGGACAT	200	0.0	13.3260355	5
TCTACAC	80	1.9486615E-6	13.089141	3
GACGTGA	345	0.0	12.928262	7
TCCTACA	1010	0.0	12.922985	2
CCTACAG	1025	0.0	12.723457	3
ACCCTAC	75	1.4324349E-5	12.702885	1
GTATAGG	75	1.4324349E-5	12.702885	1
CTACACT	145	7.2759576E-12	12.472644	4
GTAGGAC	890	0.0	12.193357	3
GGACGTG	750	0.0	12.1838045	6
AACTAGA	55	0.0029999372	12.125482	2
GGCTAAC	55	0.0029999372	12.125482	1