SRR1926745_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926745_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	654171
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	2022	0.30909349390297036	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1831	0.2798962350822644	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1552	0.2372468360719139	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1521	0.23250801395965276	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1431	0.21875014331115258	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1264	0.1932216499967134	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1110	0.16968040466483536	No Hit
CTGAAGGACCTGGAATATGGCGAGA	835	0.12764246657219594	No Hit
GGTATCAACGCAGAGTACTTTTTTT	732	0.11189734794113466	No Hit
TATCAACGCAGAGTACTTTTTTTTT	730	0.1115916174822791	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGCGCC	55	1.14110935E-5	15.524063	11
TGCGCCA	55	1.14193645E-5	15.522876	12
GCGTGCG	40	0.0053177834	14.232568	9
CGTGCGC	40	0.005320482	14.23148	10
GCGCCAC	60	2.5991536E-5	14.229304	13
TCCAACG	95	4.960384E-9	13.983942	18
TAGGACC	350	0.0	13.876852	4
ATAAACC	55	1.9170997E-4	13.852115	3
AGGCGTG	70	7.327788E-6	13.556899	7
GGCGTGC	50	0.0015126795	13.282714	8
CTAGGAC	110	2.6357156E-9	12.986358	3
GGCGAGG	390	0.0	12.895449	19
GTCTAAT	60	3.9742538E-4	12.708499	1
AAGGCGT	60	4.0026795E-4	12.697772	6
AAAGGCG	75	1.4387235E-5	12.697771	5
GTCTAGA	55	0.0029903848	12.13084	1
GTCCTAC	900	0.0	12.073075	1
GTATAGA	105	2.5968075E-7	11.800749	1
TGAACTG	65	7.849272E-4	11.72102	5
GACGAAA	65	8.105612E-4	11.676219	11