SRR1926744_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926744_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	630854
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1714	0.27169519413366644	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1515	0.24015065292444845	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1406	0.22287248713648483	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1329	0.21066681038718946	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1297	0.20559432134852118	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1144	0.1813414831323888	No Hit
CTGTAGGACCTGGAATATGGCGAGA	977	0.15486943096183903	No Hit
GGTATCAACGCAGAGTACTTTTTTT	821	0.13014104689833147	No Hit
TATCAACGCAGAGTACTTTTTTTTT	718	0.11381397280511814	No Hit
CTGAAGGACCTGGAATATGGCGAGA	679	0.10763187678924126	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAACCC	55	1.9085863E-4	13.859236	3
TAGGACC	330	0.0	13.85703	4
GGCGAGG	370	0.0	13.330522	19
AGGACCT	510	0.0	12.889074	5
GGACCTG	500	0.0	12.764771	6
GTGTTAT	60	3.9370605E-4	12.722532	1
TCTATAC	90	5.1974166E-7	12.704299	3
AATGTCC	240	0.0	12.251689	8
AAGGGTT	70	1.0607389E-4	12.248624	5
GGGCTAT	55	0.002965556	12.144236	1
GCACAGT	55	0.0030029642	12.123936	6
TCCAACG	55	0.0031010201	12.072046	18
GATATAC	175	0.0	11.99553	1
ATAAGAC	80	2.7744663E-5	11.910281	3
ACTGGAC	80	2.7744663E-5	11.910281	3
GACGTGG	410	0.0	11.802379	7
GCCATAC	65	7.721304E-4	11.7438755	1
TGCATTC	65	8.117455E-4	11.674066	12
AAATGTC	245	0.0	11.618188	7
GGTCTAC	75	1.9871428E-4	11.450279	1