SRR1926740_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926740_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	783395
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	2452	0.3129966364350041	No Hit
CTGTAGGACGTGGAATATGGCAAGA	2278	0.29078561900446137	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1963	0.2505760184836513	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1812	0.23130094013875505	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1717	0.21917423521978058	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1321	0.16862502313647648	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1291	0.1647955373725898	No Hit
CTGAAGGACCTGGAATATGGCGAGA	1007	0.1285430721411293	No Hit
GTACATGGGAAGCAGTGGTATCAAC	943	0.12037350251150442	No Hit
CCCATGTACTCTGCGTTGATACCAC	817	0.10428966230318039	No Hit
GGTATCAACGCAGAGTACTTTTTTT	793	0.10122607369207105	No Hit
TATCAACGCAGAGTACTTTTTTTTT	786	0.10033252701383082	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGAGCGA	45	6.8212237E-4	14.759359	10
TAGGACC	505	0.0	14.141875	4
CCCCTAT	55	1.9093929E-4	13.8593445	1
TCTAGGC	65	5.3277672E-5	13.184579	3
GGCGAGG	380	0.0	12.486014	19
TTAGCTG	70	1.06607986E-4	12.242823	5
TAGGACT	110	3.680907E-8	12.119159	4
ATTTAGA	260	0.0	12.093611	1
TAATACT	115	6.8277586E-8	11.592238	4
AGGACCT	855	0.0	11.582555	5
TAGTACA	75	2.0268813E-4	11.426636	4
TGTAGGA	1350	0.0	11.362651	2
GGACCTG	840	0.0	11.335221	6
GTCCTAC	1240	0.0	11.218804	1
GTCCAAT	85	5.156133E-5	11.2097645	1
TATGAAC	85	5.189912E-5	11.202583	3
CTAGCAC	85	5.189912E-5	11.202583	3
TTTAGAA	335	0.0	11.091936	2
CCTACAG	1350	0.0	11.073961	3
CTGTAGG	1360	0.0	11.069642	1