SRR1926739_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926739_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	836357
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	2867	0.34279619827418195	No Hit
CTGTAGGACGTGGAATATGGCAAGA	2557	0.3057306867761016	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	2100	0.2510889488579638	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1929	0.23064313445095813	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1771	0.21175168020354942	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1565	0.1871210499822444	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1537	0.1837731973308049	No Hit
CTGAAGGACCTGGAATATGGCGAGA	1140	0.13630542938003748	No Hit
GGTATCAACGCAGAGTACTTTTTTT	872	0.10426169685911638	No Hit
TATCAACGCAGAGTACTTTTTTTTT	860	0.1028269028656423	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGTACC	40	0.0051918146	14.284748	4
ATCCCGT	75	9.810756E-7	13.913868	10
TAGGACC	500	0.0	12.570578	4
GTCCTAA	455	0.0	12.362073	1
GACAGCC	100	1.4589205E-7	12.3371725	7
CTTACCC	85	3.823652E-6	12.326316	3
CCTTATA	125	1.3278623E-9	12.203567	2
TGTAGGA	1540	0.0	12.196137	2
GTAGGAC	1500	0.0	11.93785	3
GACGTGG	740	0.0	11.926787	7
GTGTAGC	210	0.0	11.803336	1
ATTATAC	105	2.6232738E-7	11.792708	3
CTGTAGG	1555	0.0	11.648604	1
CGTGGAA	785	0.0	11.482127	9
GTCTTAA	100	1.8460778E-6	11.440156	1
ACGTGGA	785	0.0	11.240398	8
AGGACGT	1270	0.0	11.172848	5
CTTATAC	145	1.1605152E-9	11.167101	3
GGACGTG	1240	0.0	11.13596	6
GTCCTAC	1105	0.0	11.129564	1