SRR1926708_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926708_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	858733
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	2266	0.26387713060986356	No Hit
CTGTAGGACGTGGAATATGGCAAGA	2215	0.2579381484116716	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1801	0.20972758703811314	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1581	0.1841084481439516	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1578	0.1837590962499403	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1578	0.1837590962499403	No Hit
CCCATGTACTCTGCGTTGATACCAC	1541	0.1794504228904677	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1516	0.17653915710704027	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1504	0.17514174953099507	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1018	0.11854674270116555	No Hit
GATATACACTGTTCTACAAATCCCG	924	0.10760038335547836	No Hit
CTGAAGGACCTGGAATATGGCGAGA	879	0.10236010494530896	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	580	0.0	15.294824	4
CCAACGA	85	2.7946407E-7	13.371521	19
CCCTTAG	75	1.42311255E-5	12.712313	1
GTGCACC	60	4.160823E-4	12.640437	11
TCGAACT	60	4.193671E-4	12.628659	19
ACTGTTC	430	0.0	12.594843	8
AGGACCT	865	0.0	12.571244	5
AGGACGT	935	0.0	12.34421	5
CTTAGCC	70	1.04689694E-4	12.26693	3
GTCCTAC	1145	0.0	12.240458	1
GGACGTG	930	0.0	12.205443	6
TGTAGGA	1345	0.0	12.201061	2
GGACCTG	815	0.0	12.172093	6
CTGTAGG	1325	0.0	12.088689	1
GACGTGG	520	0.0	12.059435	7
GTAGGAC	1325	0.0	12.025191	3
GTCCTAA	470	0.0	11.968507	1
GTATAGG	80	2.7593349E-5	11.917793	1
TTTAGGA	590	0.0	11.804898	2
GTCCTAT	105	2.59035E-7	11.80429	1