SRR1926696_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926696_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	689970
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	2284	0.3310288853138542	No Hit
GTCCTACAGTGGACATTTCTAAATT	2199	0.3187095091090917	No Hit
CTTTAGGACGTGAAATATGGCGAGG	2155	0.3123324202501558	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	2070	0.30001304404539325	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1639	0.23754655999536212	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1346	0.19508094554835717	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1187	0.1720364653535661	No Hit
CTGAAGGACCTGGAATATGGCGAGA	1166	0.16899285476180123	No Hit
CCCATGTACTCTGCGTTGATACCAC	1146	0.16609417800773946	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1140	0.16522457498152093	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	705	0.10217835558067742	No Hit
GAATATGGCAAGAAAACTGAAAATC	703	0.10188848790527125	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	515	0.0	14.624377	4
TGTAGGA	1140	0.0	13.718023	2
GTAGGAC	1150	0.0	13.429958	3
TCTATAC	50	0.00145871	13.347058	3
GGACCTG	820	0.0	13.253079	6
CTGTAGG	1145	0.0	12.98524	1
AGGACCT	855	0.0	12.934492	5
GGCGAGG	625	0.0	12.584479	19
ACAGGTC	70	1.08733286E-4	12.216528	8
TGTCGAG	70	1.1149369E-4	12.183768	18
AGAACCG	55	0.0029854095	12.13369	5
TAGGACA	315	0.0	12.106174	4
GCCGGTT	55	0.0031065247	12.069448	11
CTAGGAC	95	9.93643E-7	12.042459	3
ACTGTTC	245	0.0	12.0226145	8
AGGACGT	1285	0.0	11.944839	5
GGACGTG	1255	0.0	11.849683	6
GTATAAG	65	7.798492E-4	11.730256	1
GACGTGG	540	0.0	11.611555	7
TAGGACG	1330	0.0	11.540689	4