SRR1926692_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926692_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	682914
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	2574	0.376914223460055	No Hit
CTTTAGGACGTGAAATATGGCGAGG	2383	0.34894584091115427	No Hit
GTCCTACAGTGGACATTTCTAAATT	2366	0.34645650843297987	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	2332	0.34147784347663107	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1489	0.21803623882362932	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1301	0.19050715024146525	No Hit
CTGAAGGACCTGGAATATGGCGAGA	1283	0.18787138644104528	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1196	0.17513186140568213	No Hit
CCCATGTACTCTGCGTTGATACCAC	874	0.12798097564261385	No Hit
GAATATGGCAAGAAAACTGAAAATC	789	0.1155343132517418	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	780	0.11421643135153181	No Hit
GTACATGGGAAGCAGTGGTATCAAC	775	0.11348427474030405	No Hit
GGTATCAACGCAGAGTACTTTTTTT	766	0.11216639284009407	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGACGA	35	0.0021136364	16.348314	5
TAGGACC	445	0.0	14.78696	4
TCCTAGA	100	9.46784E-9	13.355062	2
GTAGCAC	50	0.001455337	13.351125	3
CTCCTAG	50	0.0014577644	13.348173	1
AGGACCT	895	0.0	13.212604	5
TGTCGAG	95	7.627568E-8	12.964933	18
GCCGGTT	60	4.1552325E-4	12.641754	11
GGACCTG	915	0.0	12.506907	6
TATGTCG	100	1.4892794E-7	12.316687	16
AGGCGTG	55	0.003065138	12.091048	7
CTAGACA	80	2.750635E-5	11.920646	4
GGCGAGG	510	0.0	11.889411	19
CTGTAGG	1450	0.0	11.770063	1
TGTAGGA	1460	0.0	11.36879	2
GATATAC	230	0.0	11.192568	1
GTAGGAC	1435	0.0	11.164703	3
TTACCCT	60	0.00570461	11.1259365	4
TCTAGGA	155	2.8921932E-10	11.07793	2
TGCCGGT	60	0.005956577	11.061535	10