SRR1926690_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926690_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	708036
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTTAGGACGTGAAATATGGCGAGG	1949	0.27526848917286695	No Hit
GTCCTACAGTGGACATTTCTAAATT	1932	0.27286748131450944	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1901	0.26848917286691637	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1794	0.25337694693490165	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1561	0.22046901569976665	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1330	0.1878435559773797	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1218	0.17202515126349507	No Hit
CTGAAGGACCTGGAATATGGCGAGA	943	0.1331853182606534	No Hit
GGTATCAACGCAGAGTACTTTTTTT	733	0.10352580942211978	No Hit
CCCATGTACTCTGCGTTGATACCAC	711	0.10041862278189245	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	445	0.0	14.145731	4
TTGTAGT	50	0.0014541241	13.352713	4
GTTCTAG	90	5.160582E-7	12.71235	1
TGTAGGA	1240	0.0	12.081052	2
GTAGGAC	1210	0.0	12.061722	3
CTGTAGG	1210	0.0	12.055719	1
TTAGAAC	65	7.7430054E-4	11.740318	3
GGATAGG	65	7.775418E-4	11.734477	1
GTATAAG	65	7.775418E-4	11.734477	1
GGACATG	295	0.0	11.639169	6
AGGACCT	820	0.0	11.631282	5
GGACCTG	800	0.0	11.564403	6
TGGCGAA	75	2.1262665E-4	11.367583	18
ATTATAC	85	5.0958006E-5	11.2223625	3
GGCGAGG	475	0.0	11.168151	19
ATAGCAC	60	0.0056938715	11.128843	3
TAATACT	60	0.0056999056	11.12726	4
GTATTGG	60	0.005715014	11.123306	1
GATTTAG	60	0.005715014	11.123306	1
TAGGACA	310	0.0	11.075983	4