SRR1926687_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926687_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	711870
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	1318	0.18514616432775646	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1285	0.18051048646522538	No Hit
GTCCTACAGTGGACATTTCTAAATT	1274	0.17896526051104839	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1213	0.17039628021970304	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1113	0.15634877154536644	No Hit
GTCCTACAGTGTGCATTTCTCATTT	971	0.13640130922780846	No Hit
CTGTAGGACCTGGAATATGGCGAGA	874	0.12277522581370195	No Hit
CCCATGTACTCTGCGTTGATACCAC	803	0.11280149465492295	No Hit
GGTATCAACGCAGAGTACTTTTTTT	749	0.10521583997078118	No Hit
GTACATGGGAAGCAGTGGTATCAAC	728	0.1022658631491705	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCTAT	75	3.09592E-9	16.5354	1
ACCGACT	35	0.0021665965	16.28801	8
AGGTATC	50	0.0014957632	13.302811	7
TAGGACC	315	0.0	13.023305	4
CCTATAC	75	1.4109242E-5	12.722238	3
ACTTACC	60	4.082303E-4	12.668452	8
TAGTACT	70	1.04704006E-4	12.266137	4
TCCTAAC	65	7.7020214E-4	11.747761	2
GGACCTG	540	0.0	11.659576	6
TGGCGAG	885	0.0	11.344164	18
TGTAGGA	840	0.0	11.249529	2
TGGACTG	85	5.0887073E-5	11.223916	5
AGGACCT	580	0.0	11.185212	5
ATAATAC	60	0.0056820693	11.131958	3
GTCTAAA	60	0.005691058	11.129595	1
AGGACGT	870	0.0	11.075553	5
CTAGGAC	130	3.049354E-8	11.009628	3
GGCGAGG	425	0.0	10.91986	19
GGACGTG	865	0.0	10.918216	6
TATTACA	70	0.0014319966	10.908635	2