SRR1926663_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926663_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	528732
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	1387	0.2623257151070864	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1345	0.2543821822776	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1169	0.2210949970873713	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1052	0.1989665842052306	No Hit
CTTTAGGACGTGAAATATGGCGAGG	928	0.17551424918484224	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	804	0.15206191416445383	No Hit
GTATCAACGCAGAGTACTTTTTTTT	765	0.1446857765370736	No Hit
GTACATGGGAAGCAGTGGTATCAAC	665	0.12577260313353458	No Hit
CCCATGTACTCTGCGTTGATACCAC	649	0.12274649538896833	No Hit
GATATACACTGTTCTACAAATCCCG	628	0.11877472897422513	No Hit
GGTATCAACGCAGAGTACTTTTTTT	554	0.10477898065560626	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTCC	80	7.879862E-9	15.406972	14
TAGGACC	385	0.0	15.357107	4
TCCAACG	155	0.0	15.282154	18
CGGTTTC	95	3.1286618E-10	14.970336	13
GCCGGTT	90	2.3392204E-9	14.748553	11
CCAACGT	65	3.4587829E-6	14.575446	19
TAGCACT	80	1.2244891E-7	14.304403	4
CCGGTTT	95	5.011316E-9	13.972314	12
GTAGGAC	895	0.0	13.748939	3
CCAACGA	105	1.4188117E-9	13.534343	19
GGCGAGG	225	0.0	13.47419	19
TTTAATC	50	0.0014517298	13.354589	3
TGCCGGT	100	1.0282747E-8	13.274955	10
TGTAGGA	905	0.0	13.175404	2
TCCTATA	80	1.9026666E-6	13.116115	2
GTCCTAT	95	7.0280294E-8	13.044663	1
GGACCTG	610	0.0	12.975579	6
CCGTTTC	95	7.543167E-8	12.974292	13
AGGACCT	650	0.0	12.763928	5
ATAGCCC	60	3.9452923E-4	12.7186575	3