SRR1926631_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926631_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	902449
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1744	0.19325191783690823	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1548	0.1715332389974392	No Hit
GTCCTACAGTGGACATTTCTAAATT	1390	0.15402532442276518	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1131	0.12532564167060964	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1108	0.1227770211945495	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1027	0.11380144473538117	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1027	0.11380144473538117	No Hit
GGTATCAACGCAGAGTACTTTTTTT	993	0.11003391881424877	No Hit
CCCATGTACTCTGCGTTGATACCAC	956	0.10593396413536942	No Hit
CTGTAGGACCTGGAATATGGCGAGA	946	0.10482586827621283	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGCTAG	95	7.090421E-8	13.038914	1
TAGGACC	410	0.0	12.784185	4
GACGTGG	410	0.0	12.74301	7
CTCGAAC	75	1.5112611E-5	12.638406	18
TGGACCG	55	0.0029950673	12.129129	5
GGACGTG	710	0.0	12.080319	6
GTCCTAA	370	0.0	11.846166	1
AGGACGT	735	0.0	11.799085	5
GTAGGAC	830	0.0	11.598075	3
TGTAGGA	905	0.0	11.586043	2
CTGTAGG	915	0.0	11.559088	1
GTCCTAG	125	1.7480488E-8	11.434124	1
TCCAACG	75	2.1154039E-4	11.374565	18
TCGAACT	75	2.1164928E-4	11.373935	19
GGCGAGG	275	0.0	11.373934	19
ATAGGAC	135	4.478352E-9	11.296108	3
ACGTGGA	460	0.0	11.153249	8
ATAAGCT	60	0.0057360306	11.118367	4
TAGGACG	755	0.0	11.107849	4
CCCGTTT	60	0.0059413696	11.065964	12