Basic Statistics
Measure | Value |
---|---|
Filename | SRR1926608_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 794708 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 1322 | 0.16635040794857986 | No Hit |
GTCCTACAGTGGACATTTCTAAATT | 1110 | 0.1396739431338303 | No Hit |
CTGTAGGACGTGGAATATGGCAAGA | 1055 | 0.1327531621677396 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TAGGACC | 295 | 0.0 | 15.521696 | 4 |
TCCAACG | 80 | 1.330609E-7 | 14.2100315 | 18 |
GTCTAGG | 90 | 5.149559E-7 | 12.715139 | 1 |
GTAGGAC | 680 | 0.0 | 12.485359 | 3 |
GTTCTAG | 85 | 3.7718164E-6 | 12.341165 | 1 |
ACCCTAC | 70 | 1.0514226E-4 | 12.261026 | 1 |
TGTAGGA | 670 | 0.0 | 12.248452 | 2 |
AGGACCT | 535 | 0.0 | 12.124814 | 5 |
CCAGGAC | 220 | 0.0 | 11.707416 | 3 |
CCAACGA | 65 | 8.2069356E-4 | 11.659514 | 19 |
CTACACT | 140 | 6.330083E-10 | 11.583527 | 4 |
CTGTAGG | 730 | 0.0 | 11.495878 | 1 |
TATGGCG | 610 | 0.0 | 11.49299 | 16 |
TGGCGAG | 595 | 0.0 | 11.463556 | 18 |
GTCTAAA | 75 | 1.9991542E-4 | 11.4436245 | 1 |
ATGGCGA | 630 | 0.0 | 11.278513 | 17 |
CTCTTAG | 120 | 1.2060809E-7 | 11.125747 | 1 |
GGACGTG | 525 | 0.0 | 11.083845 | 6 |
GTCTTAG | 95 | 1.3014527E-5 | 11.042094 | 1 |
GGCGAGG | 190 | 0.0 | 10.969148 | 19 |