SRR1926585_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926585_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	757211
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	1775	0.23441286510629136	No Hit
GTCCTACAGTGGACATTTCTAAATT	1648	0.21764078968741868	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1501	0.1982274425490385	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1434	0.18937918228868836	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1353	0.17868203182468295	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1157	0.15279756897350938	No Hit
CCCATGTACTCTGCGTTGATACCAC	1146	0.15134486952778023	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1065	0.14064771906377482	No Hit
GGTATCAACGCAGAGTACTTTTTTT	846	0.11172579373516761	No Hit
CTGTAGGACCTGGAATATGGCGAGA	845	0.11159373014919223	No Hit
TATCAACGCAGAGTACTTTTTTTTT	808	0.10670737746810335	No Hit
CTGAAGGACCTGGAATATGGCGAGA	766	0.10116070685713757	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGCGC	35	0.0021979627	16.253197	10
TAGGACC	430	0.0	13.312936	4
GTAAGGC	65	5.229863E-5	13.21053	3
CTCTAGG	125	9.640644E-11	12.9705	1
GTGTTAC	60	3.9553267E-4	12.716176	1
GTAGGAC	1015	0.0	12.689917	3
CGTTTCC	60	4.16417E-4	12.638869	14
CCAACGA	75	1.52125285E-5	12.629688	19
GGCGAGG	300	0.0	12.629688	19
TGTAGGA	1075	0.0	12.42706	2
TAGGACA	230	0.0	12.029878	4
CTGTAGG	1070	0.0	11.943698	1
AGTACTG	80	2.7385402E-5	11.926172	5
GTGTTAG	80	2.749751E-5	11.921415	1
ATCCCGT	80	2.9209377E-5	11.851289	10
TCCAACG	80	2.948717E-5	11.840333	18
GACGTGG	490	0.0	11.632491	7
ATGGCAA	850	0.0	11.589597	17
TCCCGTT	90	7.630626E-6	11.585629	11
GTATAAA	140	6.348273E-10	11.580803	1