SRR1926565_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926565_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	847481
Sequences flagged as poor quality	0
Sequence length	25
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

$Sequence length distribution$

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	1537	0.1813609980636734	No Hit
GATATACACTGTTCTACAAATCCCG	1493	0.1761691412550842	No Hit
GTCCTACAGTGGACATTTCTAAATT	1487	0.17546116078118565	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1460	0.17227524864864227	No Hit
CCCATGTACTCTGCGTTGATACCAC	1063	0.12543054062568953	No Hit
GTGTATATCAATGAGTTACAATGAA	1043	0.12307060571269444	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	990	0.11681677819325743	No Hit
GTACATGGGAAGCAGTGGTATCAAC	973	0.11481083351721158	No Hit
GGTATCAACGCAGAGTACTTTTTTT	966	0.11398485629766332	No Hit
GATATACACTGTTCTACAATGCCGG	933	0.11009096369122139	No Hit
CTTTAGGACGTGAAATATGGCGAGG	923	0.10891099623472386	No Hit
GTCCTACAGTGTGCATTTCTCATTT	899	0.10607907433912973	No Hit
GTGTATATCAATGAGTTACAATGAG	853	0.100651224039241	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	320	0.0	13.70287	4
TTGGACA	65	5.2752974E-5	13.198751	4
GTGTTAG	60	3.9846476E-4	12.705385	1
AATCCCG	225	0.0	12.636419	19
GATATAC	470	0.0	12.57022	1
TGTAGGA	920	0.0	12.54094	2
CCAACGA	145	7.2759576E-12	12.41855	19
CTATTAC	70	1.0591479E-4	12.25162	1
GCTACTC	55	0.0029851736	12.134346	3
GTAGGAC	820	0.0	12.092065	3
GACGTGG	405	0.0	11.959798	7
TACACTT	80	2.7645878E-5	11.915539	5
TCCAACG	215	0.0	11.901745	18
AGGACGT	675	0.0	11.721359	5
GGACGTG	670	0.0	11.666558	6
ACTGTTC	460	0.0	11.565577	8
TGTAGAA	495	0.0	11.557891	2
TAGGACG	685	0.0	11.550245	4
AGGACCT	530	0.0	11.51086	5
CTGTAGG	900	0.0	11.223089	1