SRR1926564_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926564_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	524202
Sequences flagged as poor quality	0
Sequence length	25
%GC	48

Per base quality graph

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAAC	2610	0.4978996646330994	No Hit
CCCATGTACTCTGCGTTGATACCAC	2516	0.4799676460601066	No Hit
GAGTACATGGGAAGCAGTGGTATCA	1277	0.24360837997565826	No Hit
CATGTACTCTGCGTTGATACCACTG	986	0.18809542886139313	No Hit
GCGTTGATACCACTGCTTCCCATGT	860	0.16405889332738144	No Hit
ACGCAGAGTACATGGGAAGCAGTGG	815	0.1554744163509487	No Hit
GTATCAACGCAGAGTACATGGGAAG	715	0.1363978008477648	No Hit
GCTTCCCATGTACTCTGCGTTGATA	633	0.120754976135154	No Hit
ACTCTGCGTTGATACCACTGCTTCC	594	0.1133150960889123	No Hit
CNCATGTACTCTGCGTTGATACCAC	555	0.10587521604267058	No Hit
GNACATGGGAAGCAGTGGTATCAAC	549	0.10473061911247955	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATTGA	45	0.0012314635	17.717836	1
CCTAGGA	70	7.146888E-5	15.54917	2
TCTAGAA	55	0.004017601	14.842388	2
TAGGACC	65	1.7539975E-5	14.831049	4
CTAACAC	45	0.0045691063	14.559218	3
GTATAGC	65	8.5969135E-4	14.310561	1
GTAGGAC	130	1.8189894E-11	14.279234	3
CTGTAGG	150	1.2187229E-10	14.174271	1
TGAAGTG	45	0.006302515	13.870351	5
TAGCCCT	85	1.0191361E-6	13.861701	4
TGTAGGA	120	2.2452514E-7	13.605523	2
GTATTAA	70	0.0015045183	13.288379	1
GTACTGT	55	0.0015570524	13.229533	6
ATACTGT	65	3.7508615E-4	12.793396	6
ATAGCCC	60	0.0020683191	12.739317	3
CCTACAC	70	4.624721E-4	12.479331	3
TGTACTG	85	2.0949012E-5	12.238545	5
TAGGACG	100	6.301276E-6	11.782446	4
GAGTGGT	85	6.7138553E-6	11.716793	13
AGGACCT	80	1.6187989E-4	11.703109	5