SRR1926531_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926531_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	533354
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTAAGCAGTGGTATCAACGCAGA	2384	0.4469826794211725	No Hit
GCTTACTCTGCGTTGATACCACTGC	2006	0.37611042572100334	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1909	0.3579236304593197	No Hit
CCCATGTACTCTGCGTTGATACCAC	1871	0.3507989065423715	No Hit
CTGCTTACTCTGCGTTGATACCACT	1195	0.2240538179145558	No Hit
GCGTTGATACCACTGCTTACTCTGC	961	0.18018051800492732	No Hit
GAGTACATGGGAAGCAGTGGTATCA	960	0.17999302527027078	No Hit
GTCCTACAGTGGACATTTCTAAATT	910	0.17061838853744418	No Hit
CATGTACTCTGCGTTGATACCACTG	711	0.13330733434079428	No Hit
CTGTAGGACGTGGAATATGGCAAGA	691	0.12955747964766365	No Hit
GCGTTGATACCACTGCTTCCCATGT	658	0.12337021940399809	No Hit
GTATCAACGCAGAGTAAGCAGTGGT	590	0.11062071344735391	No Hit
GNGTAAGCAGTGGTATCAACGCAGA	558	0.10462094593834488	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	555	0.1040584677343753	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGTATA	280	0.0	16.264263	1
TCTGCGG	70	1.9958861E-7	16.009474	7
CTGTAGA	130	1.9099389E-10	15.454728	1
GATATAC	175	0.0	15.307541	1
AAGTGTC	40	0.003311473	15.281773	7
CCCTGTA	90	2.1923988E-6	15.224017	2
CCCCTGT	80	1.50759515E-5	15.06836	1
CTGCGGT	65	2.5698846E-6	14.996603	8
CCAACGT	40	6.421121E-4	14.875462	19
TGTAGGA	510	0.0	14.776253	2
ACTCCAG	40	0.0044422955	14.621688	8
TAGACAG	50	7.478297E-4	14.578221	5
GTCCTAC	550	0.0	14.368215	1
CGGTGAT	65	4.6285077E-6	14.170221	11
TCCTACA	590	0.0	14.166077	2
TAGGACC	175	0.0	14.082469	4
CTGTAGG	490	0.0	13.940796	1
TGTATAT	300	0.0	13.701616	2
TCTTACA	60	0.0068296078	13.701615	2
CTGCGCT	50	0.0012322172	13.646908	8