Basic Statistics
Measure | Value |
---|---|
Filename | SRR1926519_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 465831 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTACATGGGAAGCAGTGGTATCAAC | 2303 | 0.4943853028244149 | No Hit |
CCCATGTACTCTGCGTTGATACCAC | 2134 | 0.45810605133621424 | No Hit |
GAGTACATGGGAAGCAGTGGTATCA | 1074 | 0.2305557165581509 | No Hit |
GTCCTACAGTGGACATTTCTAAATT | 810 | 0.1738828029907842 | No Hit |
CATGTACTCTGCGTTGATACCACTG | 787 | 0.16894539006635453 | No Hit |
GCGTTGATACCACTGCTTCCCATGT | 736 | 0.1579972135817496 | No Hit |
ACGCAGAGTACATGGGAAGCAGTGG | 681 | 0.1461903565885482 | No Hit |
GTATCAACGCAGAGTACATGGGAAG | 606 | 0.13009009705236446 | No Hit |
CTGTAGGACGTGGAATATGGCAAGA | 588 | 0.12622603476368038 | No Hit |
GCTTCCCATGTACTCTGCGTTGATA | 565 | 0.12128862183925072 | No Hit |
GNACATGGGAAGCAGTGGTATCAAC | 525 | 0.11270181675328607 | No Hit |
GTATCAACGCAGAGTACTTTTTTTT | 523 | 0.11227247649898783 | No Hit |
ACTCTGCGTTGATACCACTGCTTCC | 491 | 0.10540303243021612 | No Hit |
GTCCTAAAGTGTGTATTTCTCATTT | 466 | 0.1000362792514882 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCAGAC | 25 | 0.0040484807 | 20.350885 | 7 |
CAGACTA | 50 | 3.0720366E-7 | 18.376072 | 9 |
TAGGACC | 155 | 0.0 | 17.295305 | 4 |
TACACCA | 45 | 3.382027E-4 | 16.182331 | 5 |
GTACATA | 70 | 8.505034E-5 | 15.234398 | 1 |
GTCCTAA | 265 | 0.0 | 15.090678 | 1 |
CTGTAGG | 370 | 0.0 | 14.410917 | 1 |
TCCTAAA | 285 | 0.0 | 14.381322 | 2 |
GGACCTG | 275 | 0.0 | 14.362279 | 6 |
TTAAACA | 45 | 0.0051525305 | 14.297453 | 4 |
TTGTAGA | 140 | 6.2755134E-10 | 14.2822485 | 1 |
GAGTGTC | 50 | 8.902916E-4 | 14.24562 | 7 |
TGTAGGA | 420 | 0.0 | 13.987549 | 2 |
AGGACCT | 295 | 0.0 | 13.753022 | 5 |
TGTAGAA | 225 | 0.0 | 13.358651 | 2 |
GTATACA | 80 | 2.645354E-4 | 13.330098 | 1 |
GTACTGA | 60 | 0.008188703 | 13.330097 | 1 |
GTCCACA | 60 | 0.008188703 | 13.330097 | 1 |
TCTACAC | 75 | 5.5660246E-5 | 13.1183 | 3 |
GTAAATG | 50 | 0.009108249 | 13.1183 | 3 |