SRR1926496_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926496_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	596174
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	1696	0.28448070529744673	No Hit
GTCCTACAGTGGACATTTCTAAATT	1590	0.26670066121635627	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1443	0.24204343027371206	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1363	0.22862452908043623	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1076	0.18048422104955936	No Hit
CTGTAGGACCTGGAATATGGCGAGA	945	0.15851077034557023	No Hit
GTATCAACGCAGAGTACTTTTTTTT	933	0.1564979351665789	No Hit
CTGAAGGACCTGGAATATGGCGAGA	825	0.13838241855565656	No Hit
CCCATGTACTCTGCGTTGATACCAC	779	0.130666550369523	No Hit
GTACATGGGAAGCAGTGGTATCAAC	755	0.12664088001154025	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGACTA	40	2.6840728E-4	16.683924	5
GTGCACC	35	0.0021962498	16.254276	11
TAGGACC	345	0.0	15.199889	4
ATAGGAC	70	4.240719E-7	14.984012	3
TAGTACG	40	0.0051487614	14.301712	4
AAGGCGT	40	0.005151646	14.300506	6
TAGGACT	120	4.9112714E-11	13.507174	4
AGGCGTG	65	5.428584E-5	13.157166	7
GGCGAGG	370	0.0	13.060549	19
CTAACAC	75	1.4197725E-5	12.713707	3
GCATAGA	60	3.9652493E-4	12.711561	1
CTGTAGG	975	0.0	12.222655	1
TGTAGGA	995	0.0	12.173742	2
AAGGTGT	55	0.002984449	12.133763	6
CCCTTAT	55	0.002984449	12.133763	1
GCACTCT	55	0.002984449	12.133763	6
GCGTGCA	55	0.0030588296	12.09396	9
GACGAGG	55	0.0030588296	12.09396	7
GTAGGAC	990	0.0	12.039495	3
TTAGGAC	505	0.0	11.895498	3