SRR1926447_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1926447_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	760100
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	1868	0.245757137218787	No Hit
GTCCTACAGTGGACATTTCTAAATT	1839	0.24194184975661098	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1581	0.207998947506907	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1576	0.20734113932377318	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1441	0.18958031837916064	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1219	0.16037363504802	No Hit
CTGAAGGACCTGGAATATGGCGAGA	899	0.11827391132745692	No Hit
CCCATGTACTCTGCGTTGATACCAC	874	0.11498487041178793	No Hit
GTATCAACGCAGAGTACTTTTTTTT	839	0.11038021312985134	No Hit
GTACATGGGAAGCAGTGGTATCAAC	762	0.10024996710959085	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGACCG	35	0.0021093006	16.353683	5
TAGGGTG	70	6.945389E-6	13.628069	5
ACTGATC	50	0.001498311	13.300001	8
TAGGATC	60	3.9465606E-4	12.719531	4
TAGGACA	345	0.0	12.44302	4
GAACAGT	125	1.3169483E-9	12.209941	6
GTATTGG	55	0.0029776709	12.138155	1
GGCATGA	55	0.0029776709	12.138155	1
TGTAGGA	1215	0.0	12.097016	2
CTGTAGG	1205	0.0	11.871936	1
GGCGAGG	465	0.0	11.8151655	19
CTAGGAC	105	2.5609916E-7	11.814124	3
ATAGGAC	130	2.4283509E-9	11.744218	3
GTAGGCA	65	7.739805E-4	11.741106	4
TGGCGAG	1175	0.0	11.690241	18
GTCCTAC	965	0.0	11.661973	1
TAGGACC	435	0.0	11.623021	4
GTAGGAC	1210	0.0	11.513701	3
GGATTAT	75	1.9974392E-4	11.444546	1
CTAAATT	555	0.0	11.435274	19