SRR1565902_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1565902_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14804208
Sequences flagged as poor quality	0
Sequence length	25
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAAC	83921	0.5668726081125042	No Hit
CCCATGTACTCTGCGTTGATACCAC	55423	0.37437328629805794	No Hit
GTATCAACGCAGAGTACTTTTTTTT	44444	0.3002119397403765	No Hit
GAGTACATGGGAAGCAGTGGTATCA	35355	0.23881723358655862	No Hit
GGTATCAACGCAGAGTACTTTTTTT	28913	0.19530257883434224	No Hit
TATCAACGCAGAGTACTTTTTTTTT	26057	0.176010766668504	No Hit
GTATCAACGCAGAGTACATGGGAAG	21292	0.1438239722111443	No Hit
GCGTTGATACCACTGCTTCCCATGT	19591	0.1323339958476671	No Hit
CATGTACTCTGCGTTGATACCACTG	19202	0.12970636456877668	No Hit
TATCAACGCAGAGTACATGGGAAGC	17603	0.11890538149693655	No Hit
ACGCAGAGTACATGGGAAGCAGTGG	16537	0.11170472611570981	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCCTAC	2410	9.595639	1
GTATTAT	1575	8.626175	1
TACACCG	530	8.594768	5
GTAGGAC	2725	8.497518	3
GTATTAC	1115	8.468975	1
GTCCTAA	1770	8.437973	1
GTCTTAT	1220	8.371932	1
TGCGTTG	16355	8.317382	12
CCATGTA	16380	8.313796	2
GTATAAT	1965	8.287125	1
GTATTAA	1875	8.273787	1
CTGCGTT	16590	8.204229	11
GTCTTAA	1625	8.182865	1
GTCCTAG	1640	8.166776	1
TAGGACG	1985	8.127503	4
GTATAAG	1555	8.117468	1
TAGGACC	1650	8.109684	4
TAGGACT	1545	8.108009	4
ATTATAC	1510	8.107398	3
GTCTTAG	1995	8.01761	1