SRR1565899_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1565899_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14652672
Sequences flagged as poor quality	0
Sequence length	25
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAAC	87325	0.5959663875639883	No Hit
CCCATGTACTCTGCGTTGATACCAC	55882	0.3813775398780509	No Hit
GTATCAACGCAGAGTACTTTTTTTT	47476	0.3240091636528819	No Hit
GAGTACATGGGAAGCAGTGGTATCA	37013	0.25260239224627423	No Hit
GGTATCAACGCAGAGTACTTTTTTT	30760	0.20992758180896973	No Hit
TATCAACGCAGAGTACTTTTTTTTT	28282	0.19301599053060084	No Hit
GTATCAACGCAGAGTACATGGGAAG	22408	0.15292773904991527	No Hit
GCGTTGATACCACTGCTTCCCATGT	19592	0.1337094012614218	No Hit
CATGTACTCTGCGTTGATACCACTG	19435	0.13263792433216276	No Hit
TATCAACGCAGAGTACATGGGAAGC	18396	0.12554706745636562	No Hit
ACGCAGAGTACATGGGAAGCAGTGG	17382	0.11862682792599193	No Hit
GGTATCAACGCAGAGTACATGGGAA	16032	0.10941349127312752	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCTAC	2720	0.0	9.599859	1
TAGGACC	1645	0.0	9.287819	4
CGCGATT	155	4.315625E-7	9.186692	12
GTCCTAA	1785	0.0	8.906564	1
TATACTG	2290	0.0	8.826691	5
TAGGACG	2485	0.0	8.821438	4
TTAGGAC	2015	0.0	8.806844	3
GTCCTAG	1610	0.0	8.737586	1
GTAGGAC	2870	0.0	8.729227	3
TAATCCG	230	4.1472958E-10	8.664535	5
GTATTAA	1835	0.0	8.663878	1
GTATAAA	2315	0.0	8.615566	1
GTCTTAG	1885	0.0	8.587414	1
GTCCTAT	1225	0.0	8.573436	1
GTATTAC	1270	0.0	8.497257	1
TGCGTTG	16190	0.0	8.34368	12
CCATGTA	16220	0.0	8.32528	2
GTATAAT	2240	0.0	8.301828	1
GTCTTAT	1370	0.0	8.299003	1
CTGCGTT	16400	0.0	8.2818985	11