SRR1565899_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1565899_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14652672
Sequences flagged as poor quality	0
Sequence length	25
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAAC	93533	0.6383340867795307	No Hit
CCCATGTACTCTGCGTTGATACCAC	61038	0.41656566119817595	No Hit
GTATCAACGCAGAGTACTTTTTTTT	56197	0.3835273184303859	No Hit
GAGTACATGGGAAGCAGTGGTATCA	40756	0.27814722120306795	No Hit
GGTATCAACGCAGAGTACTTTTTTT	39099	0.266838703548404	No Hit
TATCAACGCAGAGTACTTTTTTTTT	37231	0.25409017549836643	No Hit
GTATCAACGCAGAGTACATGGGAAG	24012	0.16387454793228157	No Hit
TATCAACGCAGAGTACATGGGAAGC	22739	0.15518671270332127	No Hit
CATGTACTCTGCGTTGATACCACTG	21465	0.14649205278054406	No Hit
ACGCAGAGTACATGGGAAGCAGTGG	20356	0.1389234673375614	No Hit
GCGTTGATACCACTGCTTCCCATGT	20142	0.13746298286073694	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	17629	0.12031252729877526	No Hit
GGTATCAACGCAGAGTACATGGGAA	17435	0.11898853669828956	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	15830	0.10803490312210633	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGATT	115	1.0311298E-5	9.910534	12
CGTTCGG	150	2.7138994E-6	8.864876	10
GTAGGAC	2765	0.0	8.801395	3
GTCTTAC	1105	0.0	8.784523	1
GTATAGA	1660	0.0	8.713964	1
GTCCTAA	1880	0.0	8.706646	1
TATACCG	320	0.0	8.615047	5
GTATTAC	1210	0.0	8.572775	1
TATACTG	2140	0.0	8.52898	5
TAGGACC	1725	0.0	8.486748	4
TAGGACG	2260	0.0	8.454682	4
TTAGGAC	2185	0.0	8.440283	3
GTCCTAC	2700	0.0	8.388678	1
CTAGACA	1395	0.0	8.313718	4
AGTGGTA	23850	0.0	8.1584	14
TAGGACA	2105	0.0	8.128868	4
TGCGTTG	15825	0.0	8.036196	12
TAGACAG	1915	0.0	7.992207	5
CCATGTA	16170	0.0	7.9365263	2
CTGCGTT	16080	0.0	7.9269357	11