SRR1513052_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1513052_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1523938
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAAC	10564	0.6932040542331774	No Hit
CCCATGTACTCTGCGTTGATACCAC	8182	0.5368984827466734	No Hit
GAGTACATGGGAAGCAGTGGTATCA	4322	0.2836073383562848	No Hit
GCGTTGATACCACTGCTTCCCATGT	2755	0.18078163284858045	No Hit
GTATCAACGCAGAGTACATGGGAAG	2738	0.17966610190178342	No Hit
GCTTCCCATGTACTCTGCGTTGATA	2725	0.17881304882482096	No Hit
CATGTACTCTGCGTTGATACCACTG	2640	0.17323539409083571	No Hit
ACGCAGAGTACATGGGAAGCAGTGG	2332	0.15302459811357155	No Hit
TATCAACGCAGAGTACATGGGAAGC	2043	0.1340605720180217	No Hit
ACTCTGCGTTGATACCACTGCTTCC	1864	0.12231468734292339	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1822	0.11955866970966011	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGGTC	25	0.0060373237	18.997112	7
CGTGCGC	45	6.7700184E-4	14.775532	10
GTAGGAC	715	0.0	13.154869	3
TAGGACC	385	0.0	13.080227	4
TAGGACT	255	0.0	13.041515	4
CCAACGA	60	4.0915268E-4	12.666819	19
CGTTTAT	225	0.0	12.664741	14
TGTAGGA	825	0.0	12.553315	2
TCGAACT	100	1.442113E-7	12.350149	19
GCGTTTA	220	0.0	12.089071	13
GGACGTG	470	0.0	11.924892	6
GTCCTAC	940	0.0	11.837046	1
GTCCTAG	250	0.0	11.792531	1
GTCTACG	65	7.952012E-4	11.704745	1
TCTACGA	65	8.013611E-4	11.693985	2
GACGTGG	285	0.0	11.664893	7
GGATAGG	90	7.372395E-6	11.623463	1
TAGGACG	500	0.0	11.211977	4
CGTTTCC	85	5.3307172E-5	11.174771	14
CTGTAGG	870	0.0	11.149779	1