SRR1513018_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1513018_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1501034
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	3401	0.2265771461539179	No Hit
GTACATGGGAAGCAGTGGTATCAAC	2865	0.1908684280302778	No Hit
CCCATGTACTCTGCGTTGATACCAC	2837	0.1890030472327742	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2699	0.17980938473079222	No Hit
GTCCTACAGTGGACATTTCTAAATT	2525	0.1682173754891628	No Hit
CTGTAGGACGTGGAATATGGCAAGA	2406	0.16028950709977255	No Hit
CTTTAGGACGTGAAATATGGCGAGG	2403	0.1600896448714686	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2304	0.15349419133743805	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	2298	0.15309446688083014	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1597	0.10639332620047248	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	475	0.0	12.217132	4
TCAATAC	160	3.6379788E-12	11.882549	3
TTACACC	150	2.0827429E-9	10.781786	4
GGCGAGG	560	0.0	10.507714	19
TACACCA	165	9.058567E-10	10.378189	5
AGGACCT	1115	0.0	10.153252	5
AAGGCGT	85	6.5241446E-4	10.070258	6
TGTAGGA	1655	0.0	10.051703	2
GTATAAG	190	9.822543E-11	10.006691	1
GACGTGG	715	0.0	9.970705	7
AGGACGT	1500	0.0	9.957296	5
GGACGTG	1470	0.0	9.898996	6
TGGCGAG	1470	0.0	9.878221	18
GTAGGAC	1585	0.0	9.715952	3
CTGTAGG	1635	0.0	9.651713	1
GTCCTAA	905	0.0	9.558878	1
TAATACC	80	0.004463321	9.513341	4
TAAGTCT	90	0.0010992644	9.51334	4
TAACTTA	90	0.0011019537	9.510799	6
GGTCTAG	90	0.0011066737	9.506356	1