SRR1513002_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1513002_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1251934
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAAC	3411	0.2724584522826283	No Hit
CCCATGTACTCTGCGTTGATACCAC	2911	0.23252024467743507	No Hit
GTATCAACGCAGAGTACTTTTTTTT	2606	0.2081579380382672	No Hit
GTCCTACAGTGGACATTTCTAAATT	1946	0.15543950399941212	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1747	0.1395440973725452	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1740	0.1389849624660725	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1573	0.12564560112593795	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1468	0.11725857752884737	No Hit
GAGTACATGGGAAGCAGTGGTATCA	1455	0.11622018413111235	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1422	0.11358426242916958	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATATCCG	45	6.774194E-4	14.773985	5
GTAGAAC	155	0.0	12.868179	3
AGGACGT	935	0.0	11.579916	5
GTATAAT	165	5.456968E-12	11.54727	1
GTAGGAC	990	0.0	11.416718	3
GACGTGG	520	0.0	11.320397	7
TAGGACC	270	0.0	11.256821	4
GGACGTG	920	0.0	11.145748	6
TAGGACG	1015	0.0	11.135518	4
TGCGCAT	60	0.00588931	11.079603	10
GGTTTAC	70	0.001456797	10.887425	1
TGTAGGA	1045	0.0	10.815838	2
GGCGAGG	400	0.0	10.683476	19
ACGTGGA	560	0.0	10.682623	8
CGTGGAA	565	0.0	10.589355	9
CTGTAGG	1085	0.0	10.536218	1
GTCTTAG	145	1.3802492E-8	10.511997	1
GGTTAAA	100	2.3247618E-5	10.479146	1
ACTATAC	100	2.4030865E-5	10.447736	3
ATTATAC	100	2.4030865E-5	10.447736	3