SRR1512963_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512963_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1147200
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	3603	0.31406903765690375	No Hit
CCCATGTACTCTGCGTTGATACCAC	3022	0.26342398884239887	No Hit
GTACATGGGAAGCAGTGGTATCAAC	2958	0.25784518828451886	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2719	0.23701185495118549	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2257	0.19673988842398882	No Hit
GTCCTACAGTGGACATTTCTAAATT	1657	0.14443863319386332	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1563	0.13624476987447698	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1417	0.1235181311018131	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1417	0.1235181311018131	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1247	0.1086994421199442	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTATAC	55	0.0030504914	12.09994	3
TAGGACC	310	0.0	11.3575945	4
CTACACT	170	1.0913936E-11	11.195085	4
TAGAACG	60	0.005801741	11.101792	4
TTGACCC	60	0.005801741	11.101792	4
ATTAGGC	60	0.005841503	11.091613	3
ACGGCCA	70	0.0014703262	10.875227	5
TAGGACT	175	2.0008883E-11	10.875226	4
CCTACAC	140	8.240022E-9	10.865253	3
GTAATAC	115	8.7226726E-7	10.747151	3
GTATAGG	135	5.6383215E-8	10.560673	1
GACGTGG	425	0.0	10.512353	7
CGTGGAA	415	0.0	10.30395	9
GTAGGAC	900	0.0	10.246537	3
GTCCTAG	140	9.604446E-8	10.183507	1
CTAGGAC	150	2.41198E-8	10.140902	3
ATGGAAC	95	1.6306332E-4	10.007469	3
CCCCTAA	95	1.6349503E-4	10.0048485	1
GTCCTAA	535	0.0	9.948747	1
TGTAGGA	915	0.0	9.870324	2