SRR1512833_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512833_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2508271
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	7796	0.31081171053685985	No Hit
GTCCTACAGTGGACATTTCTAAATT	7248	0.2889639915304208	No Hit
CTGTAGGACGTGGAATATGGCAAGA	6553	0.26125566176860476	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	6161	0.245627366420933	No Hit
CTTTAGGACGTGAAATATGGCGAGG	6067	0.2418797649855219	No Hit
TATCAACGCAGAGTACTTTTTTTTT	5474	0.2182379814621307	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4430	0.17661568466884162	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3844	0.1532529778480874	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2984	0.11896641152411364	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2793	0.1113516043521613	No Hit
ATTTAGAAATGTCCACTGTAGGACG	2620	0.10445442298698984	No Hit
TTTCTAAATTTTCCACCTTTTTCAG	2579	0.10281983087154459	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2545	0.10146431545873631	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGTAT	25	0.0059890854	19.024096	1
ATCGGAC	50	0.0014861845	13.316335	3
AAGACCG	65	5.3997057E-5	13.1681595	5
TGGTCGG	65	5.4709635E-5	13.149773	10
TCGCGCG	175	0.0	13.026356	9
TAGGACC	1035	0.0	12.956112	4
TCCAACG	155	0.0	12.859285	18
GGTATCA	1965	0.0	12.827952	1
GGCGAGG	1525	0.0	12.260259	19
ATCGCGC	195	0.0	12.180331	8
TATCGCG	205	0.0	11.593804	7
CCAACGA	155	3.1832315E-10	11.021585	19
ATCCCGT	140	8.400093E-9	10.853781	10
CGCGCCT	230	0.0	10.730881	12
GTATCAA	4255	0.0	10.730394	1
ACCTTTT	935	0.0	10.660467	15
AGATCGT	90	9.4151044E-5	10.567041	6
AAATGTC	900	0.0	10.563244	7
ACCGCCC	90	9.512807E-5	10.556287	8
GCGCCAC	180	3.6379788E-11	10.547447	13