SRR1512802_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512802_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1810813
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	4354	0.24044448543278626	No Hit
GTCCTACAGTGGACATTTCTAAATT	4324	0.23878777101776935	No Hit
CTGTAGGACGTGGAATATGGCAAGA	3966	0.21901764566523435	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	3805	0.21012661163797697	No Hit
CTTTAGGACGTGAAATATGGCGAGG	3368	0.1859938049925641	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2637	0.14562519707998564	No Hit
GTCCTACAGTGTGCATTTCTCATTT	2527	0.13955057755825698	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2320	0.12811924809464037	No Hit
GTACATGGGAAGCAGTGGTATCAAC	2058	0.11365060887015943	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1880	0.10382077000772581	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	845	0.0	13.148421	4
TATGTCG	115	7.0584065E-8	11.567198	16
GGCGAGG	1020	0.0	11.450202	19
AATGTCC	600	0.0	11.038268	8
AGGACCT	1585	0.0	11.023536	5
TTTAGAA	710	0.0	10.96822	2
AAATGTC	595	0.0	10.852665	7
TTGGACT	185	5.456968E-12	10.779335	4
TGTCGAG	125	2.2572931E-7	10.634133	18
GTCCTAC	2325	0.0	10.554683	1
TAGACTG	200	1.8189894E-12	10.445399	5
GTCCTAA	1135	0.0	10.428869	1
GGACCTG	1585	0.0	10.42472	6
TGGCGAG	2260	0.0	10.419031	18
GCCTAAC	65	0.009672989	10.363648	1
GTGTAGG	365	0.0	10.282524	1
TCCTACA	2660	0.0	10.246626	2
TTAGGAC	1500	0.0	10.129998	3
GGACGTA	75	0.0026569956	10.129153	6
CATTTCT	3120	0.0	10.07857	14