SRR1512792_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512792_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1921303
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	5506	0.28657634948782157	No Hit
CTGTAGGACGTGGAATATGGCAAGA	5148	0.26794316148988473	No Hit
GTATCAACGCAGAGTACTTTTTTTT	5024	0.2614892081051245	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	4737	0.2465514289000746	No Hit
CTTTAGGACGTGAAATATGGCGAGG	4561	0.23739097893460845	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3053	0.15890257809413716	No Hit
GGTATCAACGCAGAGTACTTTTTTT	3052	0.15885053008296973	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2874	0.14958598409516874	No Hit
GTACATGGGAAGCAGTGGTATCAAC	2616	0.13615759721397405	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2454	0.1277258194048518	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2103	0.10945696748508695	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGTCCG	40	0.0052513895	14.261554	5
CGGCTTG	40	0.0052841706	14.248182	9
TAGGACC	770	0.0	12.964711	4
GGCGAGG	1115	0.0	10.98391	19
CTACACT	305	0.0	10.598474	4
GTCCTAC	2620	0.0	10.459394	1
AATGTCC	620	0.0	10.418027	8
GTCCTAA	1485	0.0	10.252006	1
TATACTG	390	0.0	10.239064	5
TCTAAAC	160	6.0936145E-9	10.10167	3
TCTACAC	350	0.0	10.050737	3
TGTAGGA	2615	0.0	9.999582	2
TCCAACG	105	4.134921E-5	9.945932	18
AGGACCT	1695	0.0	9.872305	5
CACCTTT	655	0.0	9.85723	14
TCCTACA	2865	0.0	9.857181	2
TAGAAAT	695	0.0	9.84945	4
GGACCTG	1680	0.0	9.724951	6
CTATACT	235	0.0	9.709742	4
TTTAGAA	715	0.0	9.708177	2