SRR1512705_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512705_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2911049
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	10429	0.35825573530366545	No Hit
TATCAACGCAGAGTACTTTTTTTTT	7280	0.25008167158986333	No Hit
GGTATCAACGCAGAGTACTTTTTTT	7177	0.2465434281594023	No Hit
CTGTAGGACGTGGAATATGGCAAGA	5814	0.19972181849223425	No Hit
GTCCTACAGTGGACATTTCTAAATT	5657	0.19432857365162867	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	5394	0.1852940297466652	No Hit
CTTTAGGACGTGAAATATGGCGAGG	4932	0.16942346212653925	No Hit
GTACATGGGAAGCAGTGGTATCAAC	4098	0.14077399590319503	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3608	0.12394157570003116	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	3380	0.11610934752386512	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2944	0.10113192873084581	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	1130	0.0	12.029752	4
GGCGAGG	1515	0.0	11.030028	19
AAATGTC	880	0.0	10.902077	7
GTGTAGG	420	0.0	10.651436	1
ATTTAGA	980	0.0	10.586686	1
GAAATGT	935	0.0	10.566644	6
TGTAGGA	3520	0.0	10.507409	2
CCAACGA	100	2.41546E-5	10.444058	19
GTCCTAA	1705	0.0	10.383605	1
GGTATCA	2870	0.0	10.3805895	1
TAGAAAT	1035	0.0	10.2867155	4
CGTGCGC	130	3.853129E-7	10.229169	10
TGGCGAG	3550	0.0	10.136486	18
TCCAACG	160	6.2373147E-9	10.088011	18
CTGTAGG	3490	0.0	9.981947	1
TTTAGAA	1040	0.0	9.965105	2
GTAGGAC	3580	0.0	9.930708	3
AGGACGT	3645	0.0	9.858273	5
GACGTGG	1735	0.0	9.854705	7
AATGTCC	1035	0.0	9.819888	8