Basic Statistics
Measure | Value |
---|---|
Filename | SRR1512676_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1745251 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 7427 | 0.42555483423301294 | No Hit |
CTGTAGGACGTGGAATATGGCAAGA | 5438 | 0.3115884190869967 | No Hit |
GTCCTACAGTGGACATTTCTAAATT | 5401 | 0.3094683801928777 | No Hit |
GTCCTAAAGTGTGTATTTCTCATTT | 5288 | 0.3029936668135414 | No Hit |
TATCAACGCAGAGTACTTTTTTTTT | 4821 | 0.27623533806885087 | No Hit |
GGTATCAACGCAGAGTACTTTTTTT | 4792 | 0.27457368596264947 | No Hit |
CTTTAGGACGTGAAATATGGCGAGG | 4628 | 0.2651767568103384 | No Hit |
GTACATGGGAAGCAGTGGTATCAAC | 3340 | 0.19137648395560294 | No Hit |
CTGAAGGACCTGGAATATGGCGAGA | 2543 | 0.14570970020931087 | No Hit |
CCCATGTACTCTGCGTTGATACCAC | 2431 | 0.13929228517846431 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTT | 2381 | 0.13642736775397923 | No Hit |
GTCCTACAGTGTGCATTTCTCATTT | 2287 | 0.13104132299594728 | No Hit |
TTTCTAAATTTTCCACCTTTTTCAG | 2140 | 0.12261846576796116 | No Hit |
ATTTAGAAATGTCCACTGTAGGACG | 2076 | 0.11895137146462027 | No Hit |
GTACTTTTTTTTTTTTTTTTTTTTT | 1950 | 0.11173177955491789 | No Hit |
GTCCTTCAGTGTGCATTTCTCATTT | 1947 | 0.11155988450944879 | No Hit |
GAATATGGCAAGAAAACTGAAAATC | 1908 | 0.10932524891835044 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GACTTCG | 35 | 0.0021713937 | 16.284534 | 7 |
TAGGACC | 790 | 0.0 | 12.514391 | 4 |
TAAGACT | 100 | 1.4307443E-7 | 12.357962 | 4 |
TCCAACG | 140 | 6.85759E-10 | 11.529261 | 18 |
AGGACCT | 1745 | 0.0 | 11.113495 | 5 |
CAAGTCG | 300 | 0.0 | 11.083166 | 6 |
TTTATAC | 260 | 0.0 | 10.968289 | 3 |
TAGCGAG | 70 | 0.0014985404 | 10.8510685 | 18 |
GGACCTG | 1700 | 0.0 | 10.841012 | 6 |
GGCGAGG | 1350 | 0.0 | 10.830975 | 19 |
TATGTCG | 150 | 2.1518645E-9 | 10.760644 | 16 |
CCAACGA | 115 | 8.880743E-7 | 10.733124 | 19 |
ACCTTTT | 755 | 0.0 | 10.689994 | 15 |
AAGTCGT | 320 | 0.0 | 10.686727 | 7 |
TTATACT | 215 | 0.0 | 10.611486 | 4 |
TGTAGGA | 2675 | 0.0 | 10.554766 | 2 |
GTCGAGG | 135 | 5.7338184E-8 | 10.549651 | 19 |
GTTCTAG | 200 | 1.8189894E-12 | 10.46424 | 1 |
GGACGGG | 100 | 2.3992337E-5 | 10.449842 | 6 |
TTTACAC | 155 | 3.6252459E-9 | 10.425773 | 3 |