SRR1512673_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512673_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2553045
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	7541	0.29537278034660575	No Hit
GTCCTACAGTGGACATTTCTAAATT	6388	0.250211022524084	No Hit
CTGTAGGACGTGGAATATGGCAAGA	6371	0.24954515098637117	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	6026	0.23603187566219944	No Hit
CTTTAGGACGTGAAATATGGCGAGG	5719	0.22400701906938578	No Hit
TATCAACGCAGAGTACTTTTTTTTT	5112	0.20023148828164014	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4983	0.19517869837781943	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3959	0.15506973045911843	No Hit
CTGTAGGACCTGGAATATGGCGAGA	3182	0.12463548429424473	No Hit
CTGAAGGACCTGGAATATGGCGAGA	3074	0.1204052415840692	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	1370	0.0	13.876212	4
GGTATCA	1985	0.0	11.792929	1
GACCGTG	100	1.9346553E-6	11.398201	7
AGGACCT	2475	0.0	11.368286	5
GGACCGT	135	4.7384674E-9	11.258366	6
TGTAGGA	3905	0.0	11.19845	2
TACGCTG	60	0.005851788	11.089841	5
TCGCGCG	60	0.005884317	11.081585	9
TGTCGAG	155	3.1650416E-10	11.0270605	18
CTGTAGG	3890	0.0	10.910191	1
GTAGGAC	3900	0.0	10.870055	3
GGACCTG	2465	0.0	10.790218	6
AATCCCG	185	5.456968E-12	10.778704	19
AATGTCC	870	0.0	10.699461	8
TATGTCG	145	1.4548277E-8	10.478025	16
GGCGAGG	1600	0.0	10.445078	19
GACGTGG	1785	0.0	10.429727	7
GGACGTG	3635	0.0	10.426957	6
AGGACGT	3675	0.0	10.423804	5
CCGGTTT	130	3.853438E-7	10.228954	12