SRR1512657_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512657_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2555041
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	7692	0.3010519204975576	No Hit
GTCCTACAGTGGACATTTCTAAATT	6733	0.2635182762233561	No Hit
CTGTAGGACGTGGAATATGGCAAGA	6040	0.23639542379163386	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	6000	0.23482989118374223	No Hit
CTTTAGGACGTGAAATATGGCGAGG	5039	0.1972179702791462	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4733	0.18524164582877534	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4479	0.1753005137686636	No Hit
GTCCTACAGTGTGCATTTCTCATTT	4101	0.16050623062408784	No Hit
GTACATGGGAAGCAGTGGTATCAAC	3014	0.11796288200463319	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2912	0.11397077385450957	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2711	0.1061039724998542	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	1250	12.902138	4
GGCGAGG	1820	12.342352	19
GTTCTAG	280	11.577417	1
AGGACGT	3855	11.394082	5
AGGACCT	2385	11.376283	5
GACGTGA	2050	11.291683	7
GGACGTG	3790	11.188994	6
TTAGGAC	2410	11.061884	3
GGACCTG	2350	11.020911	6
GTCCTAT	340	10.978941	1
TGGCGAG	4025	10.876635	18
TGTAGGA	4095	10.842559	2
GTAGGAC	4005	10.80195	3
TAGAAAT	1090	10.7923975	4
TAGGACG	4260	10.622617	4
GTCCTAC	3515	10.591798	1
TGAAATA	2630	10.455654	11
ACGTGAA	2420	10.354457	8
GTGAAAT	2245	10.304398	10
GTATAGA	315	10.291038	1