Basic Statistics
Measure | Value |
---|---|
Filename | SRR1512614_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2205063 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 6159 | 0.279311747555512 | No Hit |
GTCCTACAGTGGACATTTCTAAATT | 6085 | 0.27595583436845117 | No Hit |
CTGTAGGACGTGGAATATGGCAAGA | 5673 | 0.25727156094859877 | No Hit |
GTCCTAAAGTGTGTATTTCTCATTT | 5649 | 0.25618315667171415 | No Hit |
CTTTAGGACGTGAAATATGGCGAGG | 5299 | 0.24031059430048032 | No Hit |
TATCAACGCAGAGTACTTTTTTTTT | 4073 | 0.18471127582295835 | No Hit |
GGTATCAACGCAGAGTACTTTTTTT | 4028 | 0.18267051780379973 | No Hit |
GTCCTACAGTGTGCATTTCTCATTT | 3319 | 0.1505172414575003 | No Hit |
CTGAAGGACCTGGAATATGGCGAGA | 2928 | 0.13278532177992194 | No Hit |
CTGTAGGACCTGGAATATGGCGAGA | 2775 | 0.1258467445147826 | No Hit |
ATTTAGAAATGTCCACTGTAGGACG | 2437 | 0.11051838428199105 | No Hit |
TTTCTAAATTTTCCACCTTTTTCAG | 2312 | 0.10484961200655038 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CATAACG | 25 | 0.0060221367 | 19.005854 | 2 |
CCAACGA | 165 | 0.0 | 13.8136635 | 19 |
TCCAACG | 290 | 0.0 | 13.099163 | 18 |
TAGGACC | 1170 | 0.0 | 12.589349 | 4 |
GGTATCA | 1525 | 0.0 | 12.225803 | 1 |
CAACGAA | 55 | 0.0030766735 | 12.086956 | 17 |
GGCGAGG | 1395 | 0.0 | 11.369041 | 19 |
ACCTTTT | 840 | 0.0 | 11.306082 | 15 |
ACTGATC | 185 | 0.0 | 11.296421 | 8 |
CGAAATC | 160 | 4.5474735E-11 | 11.278584 | 13 |
AGACCCG | 60 | 0.00586352 | 11.086748 | 5 |
CGGTTTC | 235 | 0.0 | 10.912314 | 13 |
AATACGG | 70 | 0.0014956243 | 10.853838 | 14 |
GGCGAAA | 70 | 0.0014959072 | 10.853593 | 19 |
GGACCTG | 2010 | 0.0 | 10.824753 | 6 |
AGGACCT | 2110 | 0.0 | 10.763979 | 5 |
ACGAAAT | 160 | 5.456968E-10 | 10.685458 | 12 |
CACCTTT | 950 | 0.0 | 10.496804 | 14 |
AATGTCC | 940 | 0.0 | 10.408768 | 8 |
GATATAC | 550 | 0.0 | 10.37719 | 1 |