SRR1512576_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512576_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1764848
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAAC	5940	0.33657289466288315	No Hit
CCCATGTACTCTGCGTTGATACCAC	4754	0.2693716399372637	No Hit
GTCCTACAGTGGACATTTCTAAATT	4036	0.228688249639629	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	3859	0.21865905732391683	No Hit
CTGTAGGACGTGGAATATGGCAAGA	3792	0.21486269639085068	No Hit
GTATCAACGCAGAGTACTTTTTTTT	3591	0.20347361359165209	No Hit
CTTTAGGACGTGAAATATGGCGAGG	3477	0.19701413379509172	No Hit
GAGTACATGGGAAGCAGTGGTATCA	2618	0.1483413869069744	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2430	0.13768891145299764	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2290	0.12975621696599365	No Hit
CTGAAGGACCTGGAATATGGCGAGA	1943	0.11009446705891952	No Hit
CATGTACTCTGCGTTGATACCACTG	1775	0.10057523367451475	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGCCC	55	0.0030695507	12.090476	8
CGGTTTC	80	2.8704233E-5	11.873565	13
GGCGTGC	105	2.7217357E-7	11.761484	8
TAGGACC	550	0.0	11.576251	4
GGCGAGG	995	0.0	11.261779	19
ACCGTCC	60	0.00587776	11.082936	8
GGACCTG	1235	0.0	10.615907	6
GTATAAC	165	9.094947E-10	10.3765	1
TTAGGAC	1265	0.0	10.366792	3
AGGACGT	2120	0.0	10.354567	5
GGACGTG	2090	0.0	10.273233	6
GACGTGA	1110	0.0	10.185186	7
TCCACGA	75	0.00265053	10.132109	12
GTCCTAC	1890	0.0	10.115716	1
AGGACCT	1250	0.0	10.111077	5
TCCTACA	1995	0.0	10.098598	2
GGGCGTG	95	1.6432919E-4	10.000492	7
GATATAC	385	0.0	9.882381	1
CTATAGT	270	0.0	9.854851	4
TAGAAAT	630	0.0	9.804571	4