SRR1512564_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512564_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1830992
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAAC	7887	0.43075010704579814	No Hit
CCCATGTACTCTGCGTTGATACCAC	5756	0.3143651091867141	No Hit
GTATCAACGCAGAGTACTTTTTTTT	4555	0.2487722502337531	No Hit
GTCCTACAGTGGACATTTCTAAATT	4182	0.22840077946817897	No Hit
CTGTAGGACGTGGAATATGGCAAGA	4042	0.2207546510306981	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	3878	0.2117977577182205	No Hit
CTTTAGGACGTGAAATATGGCGAGG	3601	0.19666934645263334	No Hit
GAGTACATGGGAAGCAGTGGTATCA	3464	0.18918706362452703	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2916	0.15925793231210186	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2914	0.15914870190585212	No Hit
GTCCTACAGTGTGCATTTCTCATTT	2439	0.13320648042154198	No Hit
CATGTACTCTGCGTTGATACCACTG	2140	0.11687653468720781	No Hit
GTATCAACGCAGAGTACATGGGAAG	2094	0.1143642353434641	No Hit
GCGTTGATACCACTGCTTCCCATGT	2001	0.10928502145285178	No Hit
CTGAAGGACCTGGAATATGGCGAGA	1931	0.10546195723411134	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	645	0.0	12.375633	4
TCCAACG	115	7.106428E-8	11.561577	18
GACCCTA	85	5.3290532E-5	11.175394	11
GGCGAGG	940	0.0	10.9111595	19
GTGTAAT	180	3.45608E-11	10.569263	1
AATGTCC	570	0.0	10.332338	8
GTCCTAC	2195	0.0	10.227386	1
GTCCTAA	1130	0.0	10.185777	1
CGGTTTC	85	6.606612E-4	10.056756	13
GAAATGT	610	0.0	9.968431	6
TCCTACA	2390	0.0	9.86083	2
GGACCTG	1325	0.0	9.823842	6
GTAGGAC	2085	0.0	9.798966	3
GGACGTG	2075	0.0	9.798788	6
TGTAGGA	2185	0.0	9.785676	2
TGGCGAG	2110	0.0	9.722057	18
AAATGTC	560	0.0	9.670032	7
AGGACCT	1425	0.0	9.669698	5
TAGAAAT	580	0.0	9.666559	4
AGGACGT	2155	0.0	9.65732	5