SRR1512560_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512560_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2163310
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	7624	0.3524229074889868	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	7007	0.3239017986326509	No Hit
CTGTAGGACGTGGAATATGGCAAGA	6732	0.3111897971164558	No Hit
CTTTAGGACGTGAAATATGGCGAGG	6044	0.27938668059593863	No Hit
GTATCAACGCAGAGTACTTTTTTTT	5044	0.23316122053704738	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3993	0.1845782620151527	No Hit
CTGAAGGACCTGGAATATGGCGAGA	3328	0.15383833107599004	No Hit
CTGTAGGACCTGGAATATGGCGAGA	3088	0.14274422066185613	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2989	0.1381679001160259	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2988	0.13812167465596703	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	2721	0.12577947682024304	No Hit
ATTTAGAAATGTCCACTGTAGGACG	2584	0.11944658879217496	No Hit
TTTCTAAATTTTCCACCTTTTTCAG	2409	0.111357133281869	No Hit
GAATATGGCAAGAAAACTGAAAATC	2209	0.10211204127009074	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	1210	0.0	14.565139	4
GGCGTGC	105	1.4842954E-9	13.499555	8
CGGAATA	60	4.1960122E-4	12.629452	11
GGACCTG	2330	0.0	11.956074	6
AGGACCT	2455	0.0	11.810193	5
GTCGAGG	145	1.03682396E-10	11.7467165	19
AATGTCC	1000	0.0	11.434123	8
AAATGTC	995	0.0	11.4276085	7
TATGTCG	150	1.8371793E-10	11.375759	16
CGTGCGC	75	2.1329054E-4	11.365977	10
TGTAGGA	4085	0.0	11.342899	2
GGCGAGG	1710	0.0	11.288754	19
ACCTTTT	925	0.0	11.273275	15
GTCTTAT	205	0.0	11.26441	1
GAAATGT	1085	0.0	11.091011	6
TTTGGCG	60	0.005970742	11.059766	16
CGTTTAC	60	0.005970742	11.059766	14
CTGTAGG	3850	0.0	11.057057	1
GACCGTG	60	0.005991443	11.054624	7
GCACCGA	60	0.005991443	11.054624	6