SRR1512544_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512544_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1232629
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	4211	0.3416275294512785	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	4105	0.33302802384172364	No Hit
CTGTAGGACGTGGAATATGGCAAGA	3674	0.29806210952362794	No Hit
GTATCAACGCAGAGTACTTTTTTTT	3378	0.2740483957460031	No Hit
CTTTAGGACGTGAAATATGGCGAGG	3299	0.2676393302445424	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2076	0.16842050608901785	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1982	0.16079452941639374	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1938	0.15722492331431437	No Hit
CTGAAGGACCTGGAATATGGCGAGA	1738	0.14099944103213538	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	1543	0.12517959580701088	No Hit
ATTTAGAAATGTCCACTGTAGGACG	1506	0.12217788158480776	No Hit
TTTCTAAATTTTCCACCTTTTTCAG	1378	0.1117935729242132	No Hit
GAATATGGCAAGAAAACTGAAAATC	1350	0.10952200540470815	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1341	0.1087918587020101	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	700	0.0	12.859843	4
GCCGGTT	85	4.0800896E-6	12.256138	11
TATTGCG	70	1.1148262E-4	12.185493	16
TTGCGAG	70	1.1323499E-4	12.165149	18
GGCGAGG	980	0.0	12.068601	19
GTCGAGG	55	0.0031618252	12.042269	19
AATCCCG	150	1.4551915E-11	11.984925	19
ACCTTTT	575	0.0	11.867612	15
CACCTTT	605	0.0	11.749098	14
TGTAGGA	2220	0.0	11.695201	2
TTCCACC	620	0.0	11.609187	11
GACGTGA	1185	0.0	11.594707	7
ATAAGGG	90	7.672708E-6	11.581379	3
TGCCGGT	90	7.725112E-6	11.574299	10
TGTCGAG	90	7.799021E-6	11.564402	18
ATTTAGA	410	0.0	11.52158	1
GTGTAGG	280	0.0	11.48656	1
GGACGTG	2290	0.0	11.379086	6
TAGAAAT	450	0.0	11.370808	4
AGGACGT	2315	0.0	11.338063	5