SRR1512504_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512504_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1197663
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	5086	0.42466035938323216	No Hit
GGTATCAACGCAGAGTACTTTTTTT	3503	0.29248628370418056	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3322	0.277373518260145	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1983	0.1655724523509535	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1977	0.16507147670087494	No Hit
GTCCTACAGTGGACATTTCTAAATT	1896	0.1583083054248148	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1830	0.15279757327395102	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1755	0.14653537764796942	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1728	0.14428098722261604	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1470	0.12273903426923934	No Hit
CCCATGTACTCTGCGTTGATACCAC	1302	0.10871171606704057	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1198	0.10002813813234608	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	425	0.0	13.414596	4
AGGACCT	710	0.0	11.37564	5
GGACCTG	690	0.0	11.151733	6
CCGTGTC	60	0.005874226	11.083358	9
GACGTGA	710	0.0	10.8376	7
CTAGCAC	80	3.7634172E-4	10.68931	3
GGCGAGG	615	0.0	10.653665	19
AATGTCC	385	0.0	10.609969	8
TGGGTTG	155	3.6434358E-9	10.421555	5
TTAGGAC	870	0.0	10.3753195	3
CCACCTT	325	0.0	10.229083	13
ACGAAAT	85	6.590452E-4	10.0588455	12
GAAATGT	425	0.0	10.058426	6
ACTTATC	95	1.643762E-4	9.999604	8
TGGCGAG	1290	0.0	9.938146	18
ATGTCCA	365	0.0	9.890432	9
GTCCTAC	1040	0.0	9.787962	1
TTTAGGA	935	0.0	9.755663	2
TTTAGAA	565	0.0	9.753863	2
AGGACGT	1210	0.0	9.737593	5