SRR1512480_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512480_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	902425
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	3388	0.37543286145663074	No Hit
GTCCTACAGTGGACATTTCTAAATT	2264	0.2508795744798737	No Hit
CTGTAGGACGTGGAATATGGCAAGA	2176	0.24112807158489627	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	2160	0.23935507105853673	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2121	0.23503338227553536	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1904	0.21098706263678424	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1861	0.206222123722193	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1410	0.15624567138543372	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1143	0.12665872510180903	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1097	0.12156134858852537	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1024	0.11347203368701	No Hit
CCCATGTACTCTGCGTTGATACCAC	1009	0.11180984569354793	No Hit
CTGAAGGACCTGGAATATGGCGAGA	943	0.10449621852231486	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTCCGG	35	0.0016406951	16.98021	1
TAGGACC	310	0.0	15.590416	4
TGCGCCA	45	6.857317E-4	14.749478	12
GTGTAGG	190	0.0	13.033055	1
GCGCCAC	60	4.138132E-4	12.648753	13
ATCCTAA	80	1.8660767E-5	12.381403	1
GGCGAGG	595	0.0	12.260327	19
CTAGGGG	55	0.0031240538	12.061034	3
TGGACTG	105	2.803281E-7	11.732844	5
GTCTTAC	95	8.542731E-6	11.469089	1
TGTCCAC	360	0.0	11.3229685	10
AGGACCT	705	0.0	11.291182	5
CTAATAC	85	5.452481E-5	11.148855	3
GCAATAC	60	0.005981502	11.055949	3
TCGAACT	60	0.005993909	11.052871	19
TGTAGGA	1400	0.0	10.965695	2
CGAAATC	105	3.5194425E-6	10.841788	13
TTACACC	70	0.0015214122	10.830317	4
CTTACTC	70	0.0015214122	10.830317	3
GGACGTG	1385	0.0	10.810767	6