SRR1512468_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512468_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	717837
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	3306	0.4605502363349897	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2037	0.28376915650767515	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1903	0.2651019660452164	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1712	0.23849425426663712	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1072	0.14933752369966996	No Hit
CCCATGTACTCTGCGTTGATACCAC	1054	0.146829990652474	No Hit
GTCCTACAGTGGACATTTCTAAATT	1012	0.1409790802090168	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	984	0.13707847324671202	No Hit
CTGTAGGACGTGGAATATGGCAAGA	961	0.13387440324196162	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	926	0.1289986445390806	No Hit
CTTTAGGACGTGAAATATGGCGAGG	831	0.1157644423455464	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	808	0.11256037234079602	No Hit
GAGTACATGGGAAGCAGTGGTATCA	735	0.10239093276050133	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACTAA	40	0.003949983	14.884375	1
CGTGCGC	40	0.005348871	14.220322	10
TCAATAC	55	1.9998591E-4	13.78361	3
CTTATAC	55	1.9998591E-4	13.78361	3
GGAGTGT	90	3.749119E-8	13.68789	6
GTCCTAG	60	2.828751E-4	13.230556	1
GGCGAGG	295	0.0	12.520887	19
CTAGAAC	85	4.046633E-6	12.263359	3
TGTATAC	85	4.046633E-6	12.263359	3
GATATAG	65	5.557613E-4	12.212821	1
CTGTGCG	70	1.1136217E-4	12.185433	9
GGTGACC	70	1.1401019E-4	12.154796	8
TGTCCAC	250	0.0	12.134675	10
TATACTG	125	1.4606485E-9	12.129578	5
CTAGGGT	55	0.0031237046	12.060659	4
AAATGTC	215	0.0	11.900384	7
ATGTCCA	240	0.0	11.84695	9
GACGTGA	355	0.0	11.74519	7
TTAGGGT	65	8.184279E-4	11.663055	4
ATTACAC	65	8.184279E-4	11.663055	3